Table 4A
Oxy Hb Chain Bond Lengths: 1a4f a-chain
Bond |
total # |
average |
stddev |
min |
at |
Max |
At |
C-N |
136 |
1.32 |
0.016 |
1.28 |
1.36 |
||
C-N (PRO) |
4 |
1.32 |
0.013 |
1.3 |
1.34 |
||
C-O |
141 |
1.24 |
0.016 |
1.2 |
1.28 |
||
CA-C |
133 |
1.52 |
0.017 |
1.48 |
1.56 |
||
CA-C (GLY) |
8 |
1.51 |
0.009 |
1.5 |
1.53 |
||
CA-CB |
86 |
1.53 |
0.022 |
1.47 |
1.59 |
||
CA-CB (ALA) |
19 |
1.53 |
0.016 |
1.51 |
1.57 |
||
CA-CB (I,T,V) |
28 |
1.55 |
0.025 |
1.52 |
1.6 |
||
N-CA |
129 |
1.47 |
0.019 |
1.4 |
1.52 |
||
N-CA (GLY) |
8 |
1.47 |
0.021 |
1.44 |
1.5 |
||
N-CA (PRO) |
4 |
1.45 |
0.013 |
1.44 |
1.47 |
Table 4B
Bond |
total # |
average |
stddev |
min |
at |
max |
at |
C-N |
140 |
1.32 |
0.015 |
1.28 |
1.36 |
||
C-N (PRO) |
5 |
1.32 |
0.009 |
1.31 |
1.33 |
||
C-O |
146 |
1.24 |
0.017 |
1.19 |
1.28 |
||
CA-C |
138 |
1.52 |
0.018 |
1.46 |
1.56 |
||
CA-C (GLY) |
8 |
1.51 |
0.017 |
1.48 |
1.53 |
||
CA-CB |
96 |
1.53 |
0.023 |
1.47 |
1.59 |
||
CA-CB (ALA) |
17 |
1.52 |
0.019 |
1.49 |
1.55 |
||
CA-CB (I,T,V) |
25 |
1.56 |
0.031 |
1.51 |
1.61 |
||
N-CA |
133 |
1.47 |
0.019 |
1.41 |
1.51 |
||
N-CA (GLY) |
8 |
1.46 |
0.012 |
1.44 |
1.48 |
||
N-CA (PRO) |
5 |
1.46 |
0.01 |
1.44 |
1.47 |
Fold deviation from the means are color coded as multiples of the standard deviation according to the following scale:
<0.5 |
0.5 |
1 |
1.5 |
2 |
2.5 |
3 |
3.5 |
4 |
4.5 |
5 |
>5.0 |
Adapted from data available at http://www.rcsb.org/pdb/cgi/explore.cgi?job=geometry;pdbId=1A4F;page=;pid=264201048789105&opt=bonddist